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TCR-ligand dissociation rate is a robust and stable biomarker of CD8+ T cell potency
Mathilde Allard, Barbara Couturaud, Laura Carretero-Iglesia, Minh Ngoc Duong, Julien Schmidt, Gwennaëlle C. Monnot, Pedro Romero, Daniel E. Speiser, Michael Hebeisen, Nathalie Rufer
Mathilde Allard, Barbara Couturaud, Laura Carretero-Iglesia, Minh Ngoc Duong, Julien Schmidt, Gwennaëlle C. Monnot, Pedro Romero, Daniel E. Speiser, Michael Hebeisen, Nathalie Rufer
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Clinical Research and Public Health Immunology Therapeutics

TCR-ligand dissociation rate is a robust and stable biomarker of CD8+ T cell potency

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Abstract

Despite influencing many aspects of T cell biology, the kinetics of T cell receptor (TCR) binding to peptide-major histocompatibility molecules (pMHC) remain infrequently determined in patient monitoring or for adoptive T cell therapy. Using specifically designed reversible fluorescent pMHC multimeric complexes, we performed a comprehensive study of TCR-pMHC off-rates combined with various functional assays on large libraries of self/tumor– and virus-specific CD8+ T cell clones from melanoma patients and healthy donors. We demonstrate that monomeric TCR-pMHC dissociation rates accurately predict the extent of cytotoxicity, cytokine production, polyfunctionality, cell proliferation, activating/inhibitory receptor expression, and in vivo antitumor potency of naturally occurring antigen-specific CD8+ T cells. Our data also confirm the superior binding avidities of virus-specific T cells as compared with self/tumor–specific T cell clonotypes (n > 300). Importantly, the TCR-pMHC off-rate is a more stable and robust biomarker of CD8+ T cell potency than the frequently used functional assays/metrics that depend on the T cell’s activation state, and therefore show major intra- and interexperimental variability. Taken together, our data show that the monomeric TCR-pMHC off-rate is highly useful for the ex vivo high-throughput functional assessment of antigen-specific CD8+ T cell responses and a strong candidate as a biomarker of T cell therapeutic efficacy.

Authors

Mathilde Allard, Barbara Couturaud, Laura Carretero-Iglesia, Minh Ngoc Duong, Julien Schmidt, Gwennaëlle C. Monnot, Pedro Romero, Daniel E. Speiser, Michael Hebeisen, Nathalie Rufer

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Figure 5

TCR dissociation rates according to the antigenic specificity, clonotype repertoire, and ex vivo differentiation status of CD8+ T cell clones.

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TCR dissociation rates according to the antigenic specificity, clonotype...
(A and B) NTAmer-derived TCR dissociation rates (koff) of EM/EMRA CD28+/– clones (n = 414) specific for the differentiation antigen A2/Melan-A26–35 (derived from melanoma patients LAU618, LAU627, and LAU818 following vaccination with Melan-A/peptide, incomplete Freund’s adjuvant, and CpG), the cancer testis A2/NY-ESO-1157–165 (from patients LAU50 and LAU155 with naturally occurring T cell responses), or the persistent herpes viruses A2/pp65495–504 or A2/BMFL1259–267 (from healthy donors BCL4 and BCL6), categorized according to (A) the respective patients and donors or (B) antigenic specificity. (C) NTAmer-derived TCR dissociation rates (koff) of individual TCR-BV-CDR3 clonotypes specific for the tumor epitopes A2/Melan-A26–35 (n = 27) and A2/NY-ESO-1157–165 (n = 24), and the persistent herpes virus epitopes A2/pp65495–504 (n = 37) and A2/BMFL1259–267 (n = 55). (D) NTAmer-derived TCR dissociation rates (koff) of A2/Melan-A26–35–specific clones derived from HLA-A2–negative (HD1 and HD2), HLA-A2–positive (HD3 and HD4) healthy donors, HLA-A2–positive unvaccinated (LAU975 and LAU1013) and A2/Melan-A26–35–vaccinated (LAU618, LAU627, and LAU818) melanoma patients, categorized according to the patient/donor groups and the differentiation status of T cell clones. (A–D) Data are depicted as box (25th to 75th percentiles) and whisker (10th to 90th percentiles) with the middle line representing the median. Numbers of clones n, as well as Kruskal-Wallis test (α = 0.05) derived P values are indicated. Significant differences between the A2/Melan-A26–35– and the A2/NY-ESO-1157–165–specific groups were obtained by Mann-Whitney test (2 tailed).

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