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ISG15/GRAIL1/CD3 axis influences survival of patients with esophageal adenocarcinoma
Dyke P. McEwen, Paramita Ray, Derek J. Nancarrow, Zhuwen Wang, Srimathi Kasturirangan, Saeed Abdullah, Ayushi Balan, Rishi Hoskeri, Dafydd Thomas, Theodore S. Lawrence, David G. Beer, Kiran H. Lagisetty, Dipankar Ray
Dyke P. McEwen, Paramita Ray, Derek J. Nancarrow, Zhuwen Wang, Srimathi Kasturirangan, Saeed Abdullah, Ayushi Balan, Rishi Hoskeri, Dafydd Thomas, Theodore S. Lawrence, David G. Beer, Kiran H. Lagisetty, Dipankar Ray
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Research Article Gastroenterology Immunology

ISG15/GRAIL1/CD3 axis influences survival of patients with esophageal adenocarcinoma

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Abstract

Immunosuppression is a common feature of esophageal adenocarcinoma (EAC) and has been linked to poor overall survival (OS). We hypothesized that upstream factors might negatively influence CD3 levels and T cell activity, thus promoting immunosuppression and worse survival. We used clinical data and patient samples of those who progressed from Barrett’s to dysplasia to EAC, investigated gene (RNA-Seq) and protein (tissue microarray) expression, and performed cell biology studies to delineate a pathway impacting CD3 protein stability that might influence EAC outcome. We showed that the loss of both CD3-ε expression and CD3+ T cell number correlated with worse OS in EAC. The gene related to anergy in lymphocytes isoform 1 (GRAIL1), which is the prominent isoform in EACs, degraded (ε, γ, δ) CD3s and inactivated T cells. In contrast, isoform 2 (GRAIL2), which is reduced in EACs, stabilized CD3s. Further, GRAIL1-mediated CD3 degradation was facilitated by interferon-stimulated gene 15 (ISG15), a ubiquitin-like protein. Consequently, the overexpression of a ligase-dead GRAIL1, ISG15 knockdown, or the overexpression of a conjugation-defective ISG15–leucine-arginine-glycine-glycine mutant could increase CD3 levels. Together, we identified an ISG15/GRAIL1/mutant p53 amplification loop negatively influencing CD3 levels and T cell activity, thus promoting immunosuppression in EAC.

Authors

Dyke P. McEwen, Paramita Ray, Derek J. Nancarrow, Zhuwen Wang, Srimathi Kasturirangan, Saeed Abdullah, Ayushi Balan, Rishi Hoskeri, Dafydd Thomas, Theodore S. Lawrence, David G. Beer, Kiran H. Lagisetty, Dipankar Ray

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Figure 2

Loss of T cell engagement with CD163+ macrophages indicates worse overall patient survival.

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Loss of T cell engagement with CD163+ macrophages indicates worse overal...
A TMA from patients with treatment-naive EAC was stained for different T cell markers: CD3 (global T cells), CD8 (cytotoxic T cells), and FoxP3 (Tregs), while CD163 was used as a macrophage marker. InForm software analysis was used to determine the percentage of CD3+, CD8+, or FoxP3+ cells within 15 μm of CD163+ macrophages, as an indication of cell-cell engagement. (A–C) T cell engagement with CD163+ macrophages increases during progression from BE to HGD but is nearly absent in EAC tissue for CD3+ (global; A), CD8+ (cytotoxic; B), and FoxP3+ (regulatory; C) T cells. (D–F) Survival analysis indicates that a lack of engagement of T cells with CD163+ macrophages indicates worse OS compared with high T cell engagement with macrophages, regardless of the T cell population. For histograms, significance was determined by 1-way ANOVA test with Tukey’s multiple comparison. For statistical significance, *P < 0.05, **P < 0.01, ***P < 0.005, ****P < 0.001. Survival curve differences were determined using Mantel-Cox regression analysis.

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