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Derivation and characterization of ubiquitin-specific protease 18 inhibitors
Blessing O. Ogunlade, Kevin N. Dalby, Samuel C. Okpechi, Eun Jeong Cho, Liliya Tyutyunyk-Massey, Zibo Chen, Xiuxia Liu, Joseph Ivanic, Brian Luke, Shyamal D. Desai, Yair Alfaro, Ashwini K. Devkota, Rae M. Sammons, Gilbert G. Privé, Xi Liu, Ethan Dmitrovsky
Blessing O. Ogunlade, Kevin N. Dalby, Samuel C. Okpechi, Eun Jeong Cho, Liliya Tyutyunyk-Massey, Zibo Chen, Xiuxia Liu, Joseph Ivanic, Brian Luke, Shyamal D. Desai, Yair Alfaro, Ashwini K. Devkota, Rae M. Sammons, Gilbert G. Privé, Xi Liu, Ethan Dmitrovsky
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Research Article Cell biology Oncology

Derivation and characterization of ubiquitin-specific protease 18 inhibitors

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Abstract

Ubiquitin-Specific Protease 18 (USP18) is a deISGylation enzyme and antineoplastic target. To develop USP18 inhibitors, an enzymatically active human recombinant USP18 protein was engineered suitable for high-throughput screening of ~80,000 chemical compounds. Three of them substantially inhibited USP18 enzymatic activity, with β-lapachone having prominent antineoplastic activity. Independent β-lapachone treatments of murine and human lung cancer cell lines statistically significantly reduced proliferation and increased apoptosis. Gain of USP18 expression antagonized these effects. β-Lapachone treatments statistically significantly repressed lung cancer xenograft growth. β-Lapachone increased reactive oxygen species (ROS), but antineoplastic effects occurred at dosages with negligible ROS production. ROS scavenger treatments did not rescue β-lapachone effects at these concentrations, consistent with an ROS-independent mechanism. IFN-Stimulated Response Element (ISRE) reporter assays following β-lapachone treatment activated this reporter. USP18 cotransfection antagonized this activity. β-Lapachone treatments increased global ISGylation. RNA-seq of lung cancer cells engineered with or without enhanced USP18 expression showed specific pathways affected by β-lapachone treatment. Proteomic analysis of these treated cells revealed known and new ISGylated proteins. In silico modeling identified a unique USP18 pocket where these USP18 inhibitors bind. Engineered mutation of this pocket disrupted β-lapachone activity. Taken together, β-lapachone is an antineoplastic tool compound useful for USP18 inhibitor development.

Authors

Blessing O. Ogunlade, Kevin N. Dalby, Samuel C. Okpechi, Eun Jeong Cho, Liliya Tyutyunyk-Massey, Zibo Chen, Xiuxia Liu, Joseph Ivanic, Brian Luke, Shyamal D. Desai, Yair Alfaro, Ashwini K. Devkota, Rae M. Sammons, Gilbert G. Privé, Xi Liu, Ethan Dmitrovsky

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Figure 2

β-Lapachone reduces lung cancer cell proliferation and increases apoptosis.

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β-Lapachone reduces lung cancer cell proliferation and increases apoptos...
(A and B) Proliferation and apoptosis assays of human lung cancer A549 and H1299 lung cancer cell lines following β-lapachone treatment at the indicated concentrations are displayed. β-Lapachone treatment statistically significantly reduced proliferation and augmented apoptosis in a dose-dependent manner as compared with vehicle controls. (C) Apoptosis and proliferation were displayed for A549 lung cancer cells following β-lapachone treatment (versus vehicle treatment) at the indicated concentrations with or without cotreatment with the ROS scavenger N-acetylcysteine (NAC, 10 mM). β-Lapachone increased apoptosis significantly at the 4 μM dosage but not at lower concentrations. NAC cotreatment statistically significantly antagonized this effect only at the 4 μM dosage. (D) Growth suppression by β-lapachone treatment was also antagonized by engineered gain of USP18 expression. β-Lapachone treatment repressed proliferation of A549 and H1299 lung cancer cells transfected with an empty vector (EV). In contrast, USP18 overexpression partially reversed this growth inhibition at the 2 μM and 4 μM dosages. (E) In vivo antitumor activity of β-lapachone treatment is displayed at the left panel (12.5 mg/kg or 25 mg/kg body weight) as evaluated using the H1299 human lung cancer xenograft model. The 25 mg/kg body weight of β-lapachone statistically significantly reduced tumor growth as compared with vehicle-treated controls after 29 days of treatment. (F) Representative H&E staining, Ki-67 immunostaining, and apoptosis scoring are displayed for different treatment groups. Two-tailed Student’s t tests compared differences between study groups with a P value below 0.05 deemed statistically significant. Data are shown as mean ± SD. *P < 0.05, **P < 0.01, and ***P < 0.001.

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