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HNF1α maintains pancreatic α and β cell functions in primary human islets
Mollie F. Qian, Romina J. Bevacqua, Vy M.N. Coykendall, Xiong Liu, Weichen Zhao, Charles A. Chang, Xueying Gu, Xiao-Qing Dai, Patrick E. MacDonald, Seung K. Kim
Mollie F. Qian, Romina J. Bevacqua, Vy M.N. Coykendall, Xiong Liu, Weichen Zhao, Charles A. Chang, Xueying Gu, Xiao-Qing Dai, Patrick E. MacDonald, Seung K. Kim
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Research Article Endocrinology Genetics

HNF1α maintains pancreatic α and β cell functions in primary human islets

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Abstract

HNF1A haploinsufficiency underlies the most common form of human monogenic diabetes (HNF1A–maturity onset diabetes of the young [HNF1A-MODY]), and hypomorphic HNF1A variants confer type 2 diabetes risk. But a lack of experimental systems for interrogating mature human islets has limited our understanding of how the transcription factor HNF1α regulates adult islet function. Here, we combined conditional genetic targeting in human islet cells, RNA-Seq, chromatin mapping with cleavage under targets and release using nuclease (CUT&RUN), and transplantation-based assays to determine HNF1α-regulated mechanisms in adult human pancreatic α and β cells. Short hairpin RNA–mediated (shRNA-mediated) suppression of HNF1A in primary human pseudoislets led to blunted insulin output and dysregulated glucagon secretion after transplantation in mice, recapitulating phenotypes observed in patients with diabetes. These deficits corresponded with altered expression of genes encoding factors critical for hormone secretion, including calcium channel subunits, ATPase transporters, and extracellular matrix constituents. Additionally, HNF1A loss led to upregulation of transcriptional repressors, providing evidence for a mechanism of transcriptional derepression through HNF1α. CUT&RUN mapping of HNF1α DNA binding sites in primary human islets imputed a subset of HNF1α-regulated genes as direct targets. These data elucidate mechanistic links between HNF1A loss and diabetic phenotypes in mature human α and β cells.

Authors

Mollie F. Qian, Romina J. Bevacqua, Vy M.N. Coykendall, Xiong Liu, Weichen Zhao, Charles A. Chang, Xueying Gu, Xiao-Qing Dai, Patrick E. MacDonald, Seung K. Kim

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Figure 4

RNA-Seq of HNF1AKD α cells identifies dysregulation of calcium channel complexes and ATPase-coupled transmembrane transport as well as hormone secretion pathways shared with β cells.

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RNA-Seq of HNF1AKD α cells identifies dysregulation of calcium channel c...
(A) Schematic of methods for isolation of transduced α cells (HPi2+GFP+CD26+) from control and HNF1AKD pseudoislets for downstream RNA-Seq (n = 4 donors); left image is bright-field, and right image is blue light (488 nm) of human HNF1AKD pseudoislets. Scale bars: 1,000 μm. (B) HNF1A transcripts per million (TPM) in sequenced α cell samples. (C) DEG analysis revealed significantly up- and downregulated genes after HNF1AKD in α cells. FC = 1.5, adjusted P = 0.05. (D) Venn diagram comparing α versus β cell DEGs revealed shared and cell-specific consequences of HNF1AKD. (E and F) Gene Ontology (GO) pathways of shared (E) and α cell (F) enriched DEG sets. (G) Box plots displaying TPM of select DEGs. *P < 0.05.

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ISSN 2379-3708

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